Pocket similarity was caculated by Pocket Match.
#1 Half-Sphere Exposure Down (first shell)
Half-Sphere Exposure Down (HSEd) in the first shell measures the average residue exposure, in the side chain opposite direction, using a half-sphere around the C-alpha atom of all neighbor residues in the first shell of a residue.
Location
#2 Half-Sphere Exposure Down (second shell)
Half-Sphere Exposure Down (HSEd) in the second shell measures the average residue exposure, in the side chain opposite direction, using a half-sphere around the C-alpha atom of all neighbor residues in the second shell of a residue.
Location
#3 Half-Sphere Exposure Down
Half-Sphere Exposure Down (HSEd) measures the residue exposure in the side chain opposite direction using a half-sphere around the C-alpha atom of a residue.
Location
#4 Half-Sphere Exposure Up (first shell)
Half-Sphere Exposure Up (HSEu) in the first shell measures the average residue exposure, in the side chain direction, using a half-sphere around the C-alpha atom of all neighbor residues in the first shell of a residue.
Location
#5 Half-Sphere Exposure Up
Half-Sphere Exposure Up (HSEu) measures the residue exposure in the side chain direction using a half-sphere around the C-alpha atom of a residue.
Location
#6 Half-Sphere Exposure Up (second shell)
Half-Sphere Exposure Up (HSEu) in the second shell measures the average residue exposure, in the side chain direction, using a half-sphere around the C-alpha atom of all neighbor residues in the second shell of a residue.
Location
#7 Hydrofobic atoms
Atom property. Number of hydrophobic atoms in the residue.
Location
#8 Hydrofobic atoms (first shell)
Atom property. Number of hydrophobic atoms in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#9 Aromatic ring (second shell)
Atom property. Number of atoms in an aromatic ring in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#10 Hydrofobic atoms (second shell)
Atom property. Number of hydrophobic atoms in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#11 Acceptor atoms (second shell)
Atom property. Number of acceptor atoms in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#12 Acceptor atoms (first shell)
Atom property. Number of acceptor atoms in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#13 Donor atoms (second shell)
Atom property. Number of donor atoms in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#14 Hydrogen bond (second shell)
Interaction property. Number of hydrogen bonds established by the second shell of residue neighbors.
Location
#15 Negative atoms (second shell)
Atom property. Number of negative atoms in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#16 Hydrophobic effect (second shell)
Interaction property. Number of atoms involved in hydrophobic effect in the second shell of residue neighbors.
Location
#17 Donor atoms (first shell)
Atom property. Number of donor atoms in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#18 Positive atoms (second shell)
Atom property. Number of positive atoms in the second shell of residue neighbors averaged by the number of residues in the shell.
Location
#19 Hydrogen bond (first shell)
Interaction property. Number hydrogen bonds established between by the first shell of residue neighbors.
Location
#20 Aromatic ring (first shell)
Atom property. Number of atoms in an aromatic ring in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#21 Negative atoms (first shell)
Atom property. Number of negative atoms in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#22 Salt bridge (second shell)
Interaction property. Number of salt bridges established by the second shell of residue neighbors.
Location
#23 Aromatic ring
Atom property. Number of atoms in an aromatic ring in the residue.
Location
#24 Hydrophobic effect (first shell)
Interaction property. Number of atoms involved in hydrophobic effect in the first shell of residue neighbors.
Location
#25 Positive atoms (first shell)
Atom property. Number of positive atoms in the first shell of residue neighbors averaged by the number of residues in the shell.
Location
#26 Repulsive interaction (second shell)
Interaction property. Number of repulsive interactions established by the second shell of residue neighbors.
Location
#27 Donor atoms
Atom property. Number of donor atoms in the residue.
Location
#28 Acceptor atoms
Atom property. Number of acceptor atoms in the residue.
Location
#29 Salt bridge (first shell)
Interaction property. Number of salt bridge interactions established by the first shell of residue neighbors.
Location
#30 Positive atoms
Atom property. Number of positive atoms in the residue.
Location
#31 Repulsive interaction (first shell)
Interaction property. Number of repulsive interactions established by the first shell of residue neighbors.
Location
#32 Aromatic stacking (second shell)
Interaction property. Number of aromatic stacking interactions established by the second shell of residue neighbors.
Location
#33 Negative atoms
Atom property. Number of negative atoms in the residue.
Location
#34 Aromatic stacking (first shell)
Interaction property. Number of aromatic stacking interactions established by the first shell of residue neighbors.
Location
#35 Dissulfide bridge (first shell)
Interaction property. Number of disulfide bridge interactions established by the first shell of residue neighbors.
Location
#36 Dissulfide bridge (second shell)
Interaction property. Number of disulfide bridge interactions established by the second shell of residue neighbors.
Location